Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RCCD1A6NED2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RCCD1A6NED2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 AP005901.3-202ENST00000581653 237 ntBASIC18.27■□□□□ 0.52
RCCD1A6NED2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.27■□□□□ 0.52
RCCD1A6NED2 AD001527.2-201ENST00000622994 785 ntBASIC18.27■□□□□ 0.52
RCCD1A6NED2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RCCD1A6NED2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RCCD1A6NED2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.27■□□□□ 0.51
RCCD1A6NED2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RCCD1A6NED2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RCCD1A6NED2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
RCCD1A6NED2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RCCD1A6NED2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RCCD1A6NED2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
RCCD1A6NED2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 AC005052.1-201ENST00000625181 2492 ntBASIC18.26■□□□□ 0.51
RCCD1A6NED2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 AC092647.4-201ENST00000457211 535 ntBASIC18.26■□□□□ 0.51
RCCD1A6NED2 AC063952.2-201ENST00000498792 1227 ntBASIC18.26■□□□□ 0.51
RCCD1A6NED2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.26■□□□□ 0.51
RCCD1A6NED2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms