Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 BANF1P1-201ENST00000553684 263 ntBASIC19.77■□□□□ 0.76
SSC5DA1L4H1 AC027307.3-201ENST00000594262 1100 ntBASIC19.77■□□□□ 0.76
SSC5DA1L4H1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.77■□□□□ 0.76
SSC5DA1L4H1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SSC5DA1L4H1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SSC5DA1L4H1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 LINC00896-202ENST00000609602 2128 ntBASIC19.76■□□□□ 0.75
SSC5DA1L4H1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 HLA-V-204ENST00000476601 1289 ntBASIC19.76■□□□□ 0.75
SSC5DA1L4H1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 AC004233.3-201ENST00000607794 1269 ntBASIC19.76■□□□□ 0.75
SSC5DA1L4H1 AC004840.1-201ENST00000636359 365 ntBASIC19.76■□□□□ 0.75
SSC5DA1L4H1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC5DA1L4H1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 AC010336.2-201ENST00000564226 506 ntBASIC19.75■□□□□ 0.75
SSC5DA1L4H1 AC009407.1-201ENST00000568958 598 ntBASIC19.75■□□□□ 0.75
SSC5DA1L4H1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 TEX28P1-201ENST00000613479 1221 ntBASIC19.75■□□□□ 0.75
SSC5DA1L4H1 TEX28P2-201ENST00000617764 1221 ntBASIC19.75■□□□□ 0.75
SSC5DA1L4H1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.75■□□□□ 0.75
SSC5DA1L4H1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 MPDU1-223ENST00000582151 728 ntBASIC19.74■□□□□ 0.75
SSC5DA1L4H1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 CYP2A7P1-201ENST00000595391 815 ntBASIC19.74■□□□□ 0.75
SSC5DA1L4H1 AL132655.2-201ENST00000596276 594 ntBASIC19.74■□□□□ 0.75
SSC5DA1L4H1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.74■□□□□ 0.75
SSC5DA1L4H1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC5DA1L4H1 ABALON-201ENST00000629058 1903 ntBASIC19.74■□□□□ 0.75
SSC5DA1L4H1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms