Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42BPBQ9Y5S2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 PRYP6-201ENST00000514804 343 ntBASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 AC008738.7-201ENST00000609744 511 ntBASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPBQ9Y5S2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 HNRNPA3P5-201ENST00000455201 833 ntBASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC25.62■■□□□ 1.69
CDC42BPBQ9Y5S2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 AC018529.1-201ENST00000613063 361 ntBASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPBQ9Y5S2 AC116353.5-201ENST00000638148 1699 ntBASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 FRMD8P1-201ENST00000440433 1524 ntBASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC25.6■■□□□ 1.69
CDC42BPBQ9Y5S2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms