Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 AL645939.2-201ENST00000427340 991 ntBASIC17.87■□□□□ 0.45
YIPF1Q9Y548 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YIPF1Q9Y548 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 HMGA1P7-201ENST00000406908 502 ntBASIC17.86■□□□□ 0.45
YIPF1Q9Y548 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 AC106028.4-201ENST00000614509 607 ntBASIC17.86■□□□□ 0.45
YIPF1Q9Y548 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YIPF1Q9Y548 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 AL671277.1-201ENST00000429656 993 ntBASIC17.85■□□□□ 0.45
YIPF1Q9Y548 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 AC023141.5-201ENST00000458585 616 ntBASIC17.85■□□□□ 0.45
YIPF1Q9Y548 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 AC016396.2-201ENST00000562575 1417 ntBASIC17.85■□□□□ 0.45
YIPF1Q9Y548 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 AC026120.1-201ENST00000611536 926 ntBASIC17.85■□□□□ 0.45
YIPF1Q9Y548 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.85■□□□□ 0.45
YIPF1Q9Y548 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 AC134043.2-201ENST00000624206 2238 ntBASIC17.84■□□□□ 0.45
YIPF1Q9Y548 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 AC093525.9-201ENST00000624961 1746 ntBASIC17.84■□□□□ 0.45
YIPF1Q9Y548 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YIPF1Q9Y548 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms