Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 AC005052.1-201ENST00000625181 2492 ntBASIC16.17■□□□□ 0.18
IFT52Q9Y366 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 FAM220CP-201ENST00000395253 831 ntBASIC16.17■□□□□ 0.18
IFT52Q9Y366 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 AC019129.2-201ENST00000609837 1235 ntBASIC16.17■□□□□ 0.18
IFT52Q9Y366 AL121956.5-201ENST00000625261 221 ntBASIC16.17■□□□□ 0.18
IFT52Q9Y366 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 VENTXP7-201ENST00000475503 772 ntBASIC16.16■□□□□ 0.18
IFT52Q9Y366 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT52Q9Y366 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT52Q9Y366 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 BX276092.5-203ENST00000456199 560 ntBASIC16.15■□□□□ 0.18
IFT52Q9Y366 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 AC009533.2-201ENST00000543664 586 ntBASIC16.15■□□□□ 0.18
IFT52Q9Y366 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms