Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D4Q9Y2X8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.02□□□□□ -0.48
UBE2D4Q9Y2X8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 AC019129.2-201ENST00000609837 1235 ntBASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 AL023973.1-201ENST00000624619 620 ntBASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 AC079328.2-201ENST00000561241 3354 ntBASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 PCDHA1-201ENST00000378133 2726 ntBASIC12.02□□□□□ -0.49
UBE2D4Q9Y2X8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 ZNF444P1-201ENST00000559497 298 ntBASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 AC109462.3-201ENST00000573934 613 ntBASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 GPR32P1-201ENST00000601788 811 ntBASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 AC140113.3-201ENST00000605663 199 ntBASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 AL138966.2-201ENST00000621997 464 ntBASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.01□□□□□ -0.49
UBE2D4Q9Y2X8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 AL513523.2-202ENST00000427283 2040 ntBASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12□□□□□ -0.49
UBE2D4Q9Y2X8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms