Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MIR346-201ENST00000362234 95 ntBASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 HNRNPFP1-201ENST00000391730 1133 ntBASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 SLC25A39P2-201ENST00000537614 270 ntBASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 AC073389.1-201ENST00000595595 795 ntBASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC25.28■■□□□ 1.64
SHANK2Q9UPX8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 LINC00896-202ENST00000609602 2128 ntBASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 CDK2AP2P3-201ENST00000422476 372 ntBASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 TERF1P3-201ENST00000505638 1227 ntBASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 MIR6080-201ENST00000617359 66 ntBASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 FOXO1B-201ENST00000504678 1527 ntBASIC25.27■■□□□ 1.64
SHANK2Q9UPX8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC25.26■■□□□ 1.64
SHANK2Q9UPX8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC25.26■■□□□ 1.64
SHANK2Q9UPX8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 PPP6R2P1-201ENST00000450880 1275 ntBASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 ALG1L8P-201ENST00000533887 760 ntBASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC25.26■■□□□ 1.63
SHANK2Q9UPX8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 GNAS-203ENST00000306120 1878 ntBASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 SPDYE7P-202ENST00000420373 878 ntBASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHANK2Q9UPX8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 IGHV3-62-201ENST00000520057 340 ntBASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 AC027307.2-201ENST00000591252 911 ntBASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 AC021097.1-201ENST00000607902 574 ntBASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 AP001350.2-201ENST00000625104 1094 ntBASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 AC008677.1-201ENST00000519230 1561 ntBASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 UXT-AS1-201ENST00000590504 1525 ntBASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHANK2Q9UPX8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 AL021920.2-201ENST00000624828 1351 ntBASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 AC055876.3-201ENST00000431496 288 ntBASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHANK2Q9UPX8 AC105233.2-201ENST00000523697 349 ntBASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms