Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 AC093512.1-201ENST00000617969 520 ntBASIC17.27■□□□□ 0.36
MBD1Q9UIS9 AC092919.2-201ENST00000623631 1645 ntBASIC17.27■□□□□ 0.36
MBD1Q9UIS9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MBD1Q9UIS9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AC141586.5-201ENST00000624546 2050 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 MYCLP1-201ENST00000372451 1075 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 ACTG1P4-201ENST00000425123 1122 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 FAM185BP-201ENST00000443595 716 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AC109322.1-201ENST00000524499 1264 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AC022145.2-201ENST00000598203 171 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 REXO1L3P-201ENST00000622202 1288 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AC106820.2-201ENST00000563775 3264 ntBASIC17.26■□□□□ 0.35
MBD1Q9UIS9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD1Q9UIS9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 BCRP1-201ENST00000444246 691 ntBASIC17.25■□□□□ 0.35
MBD1Q9UIS9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 HLA-J-203ENST00000494367 1087 ntBASIC17.25■□□□□ 0.35
MBD1Q9UIS9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 AL139327.4-201ENST00000612362 153 ntBASIC17.25■□□□□ 0.35
MBD1Q9UIS9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 AL121761.2-201ENST00000598007 1648 ntBASIC17.25■□□□□ 0.35
MBD1Q9UIS9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD1Q9UIS9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms