Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC079781.3-201ENST00000449110 356 ntBASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 SART3-203ENST00000546611 1184 ntBASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 AC104692.2-201ENST00000603054 253 ntBASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 AC148477.5-201ENST00000625164 1645 ntBASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.97■□□□□ 0.47
PPARGC1AQ9UBK2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 AL031008.1-201ENST00000619963 541 ntBASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 AL022326.1-202ENST00000641533 845 ntBASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.96■□□□□ 0.47
PPARGC1AQ9UBK2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.96■□□□□ 0.46
PPARGC1AQ9UBK2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PPARGC1AQ9UBK2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.96■□□□□ 0.46
PPARGC1AQ9UBK2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 AC022211.2-201ENST00000585075 2527 ntBASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 AL160237.2-201ENST00000556165 472 ntBASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PPARGC1AQ9UBK2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms