Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 AC003101.2-201ENST00000612557 442 ntBASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXXC1Q9P0U4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 AL353732.1-201ENST00000569618 1459 ntBASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 AC009477.1-201ENST00000452936 217 ntBASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 RARRES2P9-201ENST00000565168 469 ntBASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 AC009407.1-201ENST00000568958 598 ntBASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.27■□□□□ 0.52
CXXC1Q9P0U4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.27■□□□□ 0.51
CXXC1Q9P0U4 AC138969.3-201ENST00000546612 1459 ntBASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AC138932.2-201ENST00000548268 1459 ntBASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AC126755.4-201ENST00000549796 1459 ntBASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AC142381.1-201ENST00000426099 345 ntBASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 API5-211ENST00000534695 560 ntTSL 5 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AC008738.7-201ENST00000609744 511 ntBASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CXXC1Q9P0U4 AP3S2-216ENST00000617003 1561 ntBASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 SLC22A20-204ENST00000530038 1673 ntBASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXXC1Q9P0U4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms