Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 MIR4515-201ENST00000584082 81 ntBASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FBXO28Q9NVF7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 AC109322.1-201ENST00000524499 1264 ntBASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.67■□□□□ 0.74
FBXO28Q9NVF7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 EGFEM1P-202ENST00000431685 1563 ntBASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 AL671277.1-201ENST00000429656 993 ntBASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 LINC02084-201ENST00000606069 1096 ntBASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.66■□□□□ 0.74
FBXO28Q9NVF7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 AC026120.1-201ENST00000611536 926 ntBASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FBXO28Q9NVF7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms