Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 ME2P1-201ENST00000426028 1970 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC079328.2-201ENST00000561241 3354 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC246785.2-201ENST00000432512 513 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 KRT18P21-201ENST00000515767 1272 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC009533.2-201ENST00000543664 586 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AC011840.4-201ENST00000578471 627 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 AP005901.3-202ENST00000581653 237 ntBASIC16.27■□□□□ 0.2
SLC52A3Q9NQ40 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC52A3Q9NQ40 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC52A3Q9NQ40 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC52A3Q9NQ40 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC52A3Q9NQ40 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC52A3Q9NQ40 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 AL365203.3-201ENST00000609742 2057 ntBASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 LINC00895-201ENST00000629028 1637 ntBASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 MTHFR-217ENST00000641820 1569 ntBASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC52A3Q9NQ40 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC52A3Q9NQ40 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms