Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AP005242.2-201ENST00000580065 1175 ntBASIC15.71■□□□□ 0.11
HMG20AQ9NP66 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.71■□□□□ 0.11
HMG20AQ9NP66 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HMG20AQ9NP66 AC092171.3-201ENST00000610122 2651 ntBASIC15.71■□□□□ 0.1
HMG20AQ9NP66 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.7■□□□□ 0.1
HMG20AQ9NP66 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 MIR718-201ENST00000390190 70 ntBASIC15.7■□□□□ 0.1
HMG20AQ9NP66 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 AC144831.1-201ENST00000573312 2656 ntBASIC15.7■□□□□ 0.1
HMG20AQ9NP66 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMG20AQ9NP66 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 AC008550.1-201ENST00000511500 884 ntBASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMG20AQ9NP66 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 AC078925.2-201ENST00000624013 1973 ntBASIC15.68■□□□□ 0.1
HMG20AQ9NP66 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms