Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 AC097493.3-201ENST00000509725 367 ntBASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH11XQ9BZA7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 AC016027.1-202ENST00000607927 1699 ntBASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 AC092580.3-201ENST00000430932 139 ntBASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDH11XQ9BZA7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 AC063926.2-201ENST00000623766 1308 ntBASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH11XQ9BZA7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
PCDH11XQ9BZA7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 SLC25A6P5-201ENST00000435663 894 ntBASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms