Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
VGLL1Q99990 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VGLL1Q99990 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 MIR662-201ENST00000384847 95 ntBASIC13.1□□□□□ -0.31
VGLL1Q99990 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.1□□□□□ -0.31
VGLL1Q99990 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.1□□□□□ -0.31
VGLL1Q99990 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VGLL1Q99990 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.1□□□□□ -0.31
VGLL1Q99990 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
VGLL1Q99990 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
VGLL1Q99990 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.09□□□□□ -0.31
VGLL1Q99990 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.09□□□□□ -0.31
VGLL1Q99990 COX5BP2-201ENST00000392354 334 ntBASIC13.09□□□□□ -0.31
VGLL1Q99990 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.09□□□□□ -0.31
VGLL1Q99990 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VGLL1Q99990 AL359075.1-203ENST00000462729 1002 ntBASIC13.09□□□□□ -0.31
VGLL1Q99990 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.09□□□□□ -0.31
VGLL1Q99990 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 YBX1P2-201ENST00000489612 999 ntBASIC13.09□□□□□ -0.31
VGLL1Q99990 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 AC005332.3-201ENST00000589904 676 ntBASIC13.09□□□□□ -0.31
VGLL1Q99990 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.09□□□□□ -0.31
VGLL1Q99990 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.09□□□□□ -0.31
VGLL1Q99990 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.09□□□□□ -0.31
VGLL1Q99990 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
VGLL1Q99990 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.09□□□□□ -0.31
VGLL1Q99990 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VGLL1Q99990 PCDH8P1-201ENST00000428983 2773 ntBASIC13.09□□□□□ -0.31
VGLL1Q99990 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VGLL1Q99990 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VGLL1Q99990 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.08□□□□□ -0.31
VGLL1Q99990 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
VGLL1Q99990 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VGLL1Q99990 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VGLL1Q99990 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 RNF216P1-203ENST00000404404 2427 ntBASIC13.08□□□□□ -0.32
VGLL1Q99990 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
VGLL1Q99990 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.08□□□□□ -0.32
VGLL1Q99990 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VGLL1Q99990 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms