Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
FOXB1Q99853 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXB1Q99853 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 LAGE3P1-201ENST00000425356 484 ntBASIC15.15■□□□□ 0.02
FOXB1Q99853 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 AF186996.4-201ENST00000467186 377 ntBASIC15.15■□□□□ 0.02
FOXB1Q99853 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
FOXB1Q99853 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXB1Q99853 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
FOXB1Q99853 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXB1Q99853 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.15■□□□□ 0.02
FOXB1Q99853 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 AL139424.1-201ENST00000607572 797 ntBASIC15.15■□□□□ 0.02
FOXB1Q99853 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXB1Q99853 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXB1Q99853 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 GPR89P-201ENST00000407924 1495 ntBASIC15.14■□□□□ 0.01
FOXB1Q99853 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 KRT18P67-201ENST00000432816 1264 ntBASIC15.14■□□□□ 0.01
FOXB1Q99853 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 RNPS1P1-201ENST00000507437 918 ntBASIC15.14■□□□□ 0.01
FOXB1Q99853 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 OR7E14P-202ENST00000530490 1290 ntBASIC15.14■□□□□ 0.01
FOXB1Q99853 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXB1Q99853 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AC107918.4-202ENST00000641623 219 ntBASIC15.14■□□□□ 0.01
FOXB1Q99853 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 LTB4R2-202ENST00000528054 3092 ntBASIC15.14■□□□□ 0.01
FOXB1Q99853 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXB1Q99853 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXB1Q99853 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXB1Q99853 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXB1Q99853 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FOXB1Q99853 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 AC012313.1-201ENST00000593393 3059 ntBASIC15.13■□□□□ 0.01
FOXB1Q99853 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXB1Q99853 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
FOXB1Q99853 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXB1Q99853 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXB1Q99853 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXB1Q99853 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 RPS2P1-201ENST00000434010 821 ntBASIC15.13■□□□□ 0.01
FOXB1Q99853 AC018712.1-201ENST00000455767 687 ntBASIC15.13■□□□□ 0.01
FOXB1Q99853 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXB1Q99853 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.13■□□□□ 0.01
FOXB1Q99853 AL160237.2-201ENST00000556165 472 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms