Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.99■□□□□ 0.47
SMOQ99835 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SMOQ99835 AC107918.2-201ENST00000530817 355 ntBASIC17.99■□□□□ 0.47
SMOQ99835 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.99■□□□□ 0.47
SMOQ99835 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.99■□□□□ 0.47
SMOQ99835 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 REXO1L3P-201ENST00000622202 1288 ntBASIC17.99■□□□□ 0.47
SMOQ99835 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.99■□□□□ 0.47
SMOQ99835 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
SMOQ99835 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMOQ99835 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SMOQ99835 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.98■□□□□ 0.47
SMOQ99835 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SMOQ99835 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 AC023274.1-201ENST00000418278 595 ntBASIC17.98■□□□□ 0.47
SMOQ99835 FAM185BP-201ENST00000443595 716 ntBASIC17.98■□□□□ 0.47
SMOQ99835 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.98■□□□□ 0.47
SMOQ99835 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.98■□□□□ 0.47
SMOQ99835 AC096734.2-201ENST00000562054 433 ntBASIC17.98■□□□□ 0.47
SMOQ99835 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.98■□□□□ 0.47
SMOQ99835 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.98■□□□□ 0.47
SMOQ99835 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.98■□□□□ 0.47
SMOQ99835 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.98■□□□□ 0.47
SMOQ99835 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.98■□□□□ 0.47
SMOQ99835 ACTL9-202ENST00000612068 1252 ntBASIC17.98■□□□□ 0.47
SMOQ99835 HTR7P1-202ENST00000624664 4411 ntBASIC17.98■□□□□ 0.47
SMOQ99835 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SMOQ99835 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SMOQ99835 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SMOQ99835 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.98■□□□□ 0.47
SMOQ99835 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMOQ99835 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.98■□□□□ 0.47
SMOQ99835 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SMOQ99835 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
SMOQ99835 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SMOQ99835 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 RHOQP3-201ENST00000437982 621 ntBASIC17.97■□□□□ 0.47
SMOQ99835 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.97■□□□□ 0.47
SMOQ99835 CXCL1P1-201ENST00000502804 216 ntBASIC17.97■□□□□ 0.47
SMOQ99835 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.97■□□□□ 0.47
SMOQ99835 AC023511.2-201ENST00000618803 211 ntBASIC17.97■□□□□ 0.47
SMOQ99835 AC092865.6-201ENST00000642101 219 ntBASIC17.97■□□□□ 0.47
SMOQ99835 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.97■□□□□ 0.47
SMOQ99835 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SMOQ99835 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMOQ99835 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.97■□□□□ 0.47
SMOQ99835 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMOQ99835 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.96■□□□□ 0.47
SMOQ99835 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.96■□□□□ 0.47
SMOQ99835 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.96■□□□□ 0.47
SMOQ99835 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.96■□□□□ 0.47
SMOQ99835 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms