Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AP003041.3-201ENST00000527151 707 ntBASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AL109923.1-201ENST00000618799 583 ntBASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 KRT89P-201ENST00000620027 1478 ntBASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM12Q96EX1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 AL122018.1-201ENST00000446607 2310 ntBASIC13.15□□□□□ -0.3
SMIM12Q96EX1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 MYCLP1-201ENST00000372451 1075 ntBASIC13.15□□□□□ -0.3
SMIM12Q96EX1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PVRIG2P-201ENST00000435460 978 ntBASIC13.15□□□□□ -0.3
SMIM12Q96EX1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 AL023803.3-201ENST00000615559 522 ntBASIC13.15□□□□□ -0.3
SMIM12Q96EX1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM12Q96EX1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM12Q96EX1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM12Q96EX1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
SMIM12Q96EX1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM12Q96EX1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SMIM12Q96EX1 RNF216P1-203ENST00000404404 2427 ntBASIC13.14□□□□□ -0.31
SMIM12Q96EX1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM12Q96EX1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM12Q96EX1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM12Q96EX1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM12Q96EX1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
SMIM12Q96EX1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms