Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIFAQ96CG3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIFAQ96CG3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 AL132655.2-201ENST00000596276 594 ntBASIC18.26■□□□□ 0.51
TIFAQ96CG3 MIR6805-201ENST00000615055 62 ntBASIC18.26■□□□□ 0.51
TIFAQ96CG3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIFAQ96CG3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIFAQ96CG3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIFAQ96CG3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.26■□□□□ 0.51
TIFAQ96CG3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIFAQ96CG3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 WIZP1-201ENST00000531444 2299 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 AL135999.2-201ENST00000622438 1686 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 WASH6P-202ENST00000359512 1437 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC138932.1-201ENST00000534164 6830 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 ACA64.2-201ENST00000459014 129 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC109635.5-201ENST00000533593 962 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC140912.1-201ENST00000577171 1054 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC027307.2-201ENST00000591252 911 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 SPDYE12P-201ENST00000618416 771 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC007541.1-201ENST00000570282 1469 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AC126763.1-201ENST00000552015 2118 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.25■□□□□ 0.51
TIFAQ96CG3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIFAQ96CG3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 MIR346-201ENST00000362234 95 ntBASIC18.24■□□□□ 0.51
TIFAQ96CG3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 AL162274.1-201ENST00000617191 1098 ntBASIC18.24■□□□□ 0.51
TIFAQ96CG3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 IGHV3-72-202ENST00000621503 303 ntBASIC18.24■□□□□ 0.51
TIFAQ96CG3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIFAQ96CG3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.24■□□□□ 0.51
TIFAQ96CG3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIFAQ96CG3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIFAQ96CG3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIFAQ96CG3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIFAQ96CG3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TIFAQ96CG3 AL353779.1-201ENST00000434793 351 ntBASIC18.23■□□□□ 0.51
TIFAQ96CG3 INE1-201ENST00000456273 945 ntBASIC18.23■□□□□ 0.51
TIFAQ96CG3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.23■□□□□ 0.51
TIFAQ96CG3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms