Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 AC019129.2-201ENST00000609837 1235 ntBASIC16.59■□□□□ 0.25
VPS33AQ96AX1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.59■□□□□ 0.25
VPS33AQ96AX1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 LINC02199-201ENST00000506655 2702 ntBASIC16.59■□□□□ 0.25
VPS33AQ96AX1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS33AQ96AX1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS33AQ96AX1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 HBZP1-201ENST00000354915 429 ntBASIC16.58■□□□□ 0.24
VPS33AQ96AX1 KRT18P38-201ENST00000449496 1282 ntBASIC16.58■□□□□ 0.24
VPS33AQ96AX1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC109462.3-201ENST00000573934 613 ntBASIC16.58■□□□□ 0.24
VPS33AQ96AX1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AL390719.2-201ENST00000606993 987 ntBASIC16.58■□□□□ 0.24
VPS33AQ96AX1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS33AQ96AX1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 Z83836.1-201ENST00000624605 1642 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 AC007967.3-201ENST00000434308 558 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 VENTXP5-201ENST00000523979 775 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 RNF126P1-202ENST00000569893 925 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms