Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC079776.4-201ENST00000511039 504 ntBASIC15.48■□□□□ 0.07
CPNE4Q96A23 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CPNE4Q96A23 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE4Q96A23 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 KRT18P27-201ENST00000427733 1299 ntBASIC15.47■□□□□ 0.07
CPNE4Q96A23 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 AC136632.2-201ENST00000512891 861 ntBASIC15.47■□□□□ 0.07
CPNE4Q96A23 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 AL353135.1-201ENST00000606729 504 ntBASIC15.47■□□□□ 0.07
CPNE4Q96A23 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.47■□□□□ 0.07
CPNE4Q96A23 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE4Q96A23 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPNE4Q96A23 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 GPR89P-201ENST00000407924 1495 ntBASIC15.46■□□□□ 0.07
CPNE4Q96A23 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 AC005593.1-201ENST00000624894 515 ntBASIC15.46■□□□□ 0.07
CPNE4Q96A23 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE4Q96A23 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE4Q96A23 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE4Q96A23 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE4Q96A23 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE4Q96A23 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE4Q96A23 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE4Q96A23 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE4Q96A23 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE4Q96A23 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.45■□□□□ 0.06
CPNE4Q96A23 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms