Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S1Q92572 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
AP3S1Q92572 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
AP3S1Q92572 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
AP3S1Q92572 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S1Q92572 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3S1Q92572 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
AP3S1Q92572 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.21■□□□□ 0.03
AP3S1Q92572 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 AL162430.1-201ENST00000480705 870 ntBASIC15.21■□□□□ 0.03
AP3S1Q92572 AP003097.1-201ENST00000530657 1135 ntBASIC15.21■□□□□ 0.03
AP3S1Q92572 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3S1Q92572 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.21■□□□□ 0.03
AP3S1Q92572 AC098934.4-201ENST00000564127 592 ntBASIC15.21■□□□□ 0.03
AP3S1Q92572 SLC25A1P4-201ENST00000567977 778 ntBASIC15.21■□□□□ 0.03
AP3S1Q92572 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S1Q92572 AC092364.2-201ENST00000596710 2692 ntBASIC15.21■□□□□ 0.03
AP3S1Q92572 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S1Q92572 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP3S1Q92572 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S1Q92572 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S1Q92572 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.21■□□□□ 0.02
AP3S1Q92572 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
AP3S1Q92572 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.21■□□□□ 0.02
AP3S1Q92572 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP3S1Q92572 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
AP3S1Q92572 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP3S1Q92572 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.21■□□□□ 0.02
AP3S1Q92572 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP3S1Q92572 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP3S1Q92572 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 MTHFR-217ENST00000641820 1569 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S1Q92572 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
AP3S1Q92572 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
AP3S1Q92572 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3S1Q92572 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S1Q92572 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP3S1Q92572 KRT18P29-201ENST00000397031 1267 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S1Q92572 NCF1B-203ENST00000435988 1254 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 AP002490.2-201ENST00000524791 560 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3S1Q92572 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S1Q92572 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.2■□□□□ 0.02
AP3S1Q92572 AC073195.1-201ENST00000607241 877 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 CR769767.2-201ENST00000622735 460 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S1Q92572 AL365209.1-201ENST00000624418 6473 ntBASIC15.2■□□□□ 0.02
AP3S1Q92572 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
AP3S1Q92572 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3S1Q92572 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
AP3S1Q92572 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3S1Q92572 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
AP3S1Q92572 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms