Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 CXCL1P1-201ENST00000502804 216 ntBASIC17.28■□□□□ 0.36
CHD5Q8TDI0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.27■□□□□ 0.36
CHD5Q8TDI0 AC002347.1-201ENST00000569543 541 ntBASIC17.27■□□□□ 0.36
CHD5Q8TDI0 AC007064.4-201ENST00000637740 555 ntBASIC17.27■□□□□ 0.36
CHD5Q8TDI0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.27■□□□□ 0.35
CHD5Q8TDI0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHD5Q8TDI0 AL353732.1-201ENST00000569618 1459 ntBASIC17.27■□□□□ 0.35
CHD5Q8TDI0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD5Q8TDI0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD5Q8TDI0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD5Q8TDI0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 AC004877.2-201ENST00000623941 599 ntBASIC17.26■□□□□ 0.35
CHD5Q8TDI0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 AL513190.1-201ENST00000621254 727 ntBASIC17.26■□□□□ 0.35
CHD5Q8TDI0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.26■□□□□ 0.35
CHD5Q8TDI0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CHD5Q8TDI0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 AC005915.1-201ENST00000624912 2018 ntBASIC17.25■□□□□ 0.35
CHD5Q8TDI0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 AC140658.5-201ENST00000438532 169 ntBASIC17.25■□□□□ 0.35
CHD5Q8TDI0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 AC005412.3-201ENST00000580309 715 ntBASIC17.25■□□□□ 0.35
CHD5Q8TDI0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD5Q8TDI0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AC091167.2-201ENST00000579581 588 ntBASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AC099522.2-201ENST00000607001 744 ntBASIC17.24■□□□□ 0.35
CHD5Q8TDI0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 FZD10-202ENST00000539839 3282 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms