Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 FDX1P1-201ENST00000449115 551 ntBASIC18.23■□□□□ 0.51
UBA3Q8TBC4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBA3Q8TBC4 HLA-A-201ENST00000376802 1334 ntBASIC18.23■□□□□ 0.51
UBA3Q8TBC4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.22■□□□□ 0.51
UBA3Q8TBC4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 ELK2BP-201ENST00000415014 1224 ntBASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AC079776.4-201ENST00000511039 504 ntBASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 MIR7706-201ENST00000613747 67 ntBASIC18.22■□□□□ 0.51
UBA3Q8TBC4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AC008735.5-201ENST00000623544 497 ntBASIC18.22■□□□□ 0.51
UBA3Q8TBC4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBA3Q8TBC4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 LINC02012-201ENST00000608206 1725 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 RPS2P28-201ENST00000314255 741 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AC073621.1-201ENST00000392730 636 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 PTCHD3P3-201ENST00000403073 906 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AL662844.1-201ENST00000546340 181 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AP001005.1-201ENST00000571755 1248 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AC006557.2-201ENST00000592985 1240 ntBASIC18.21■□□□□ 0.51
UBA3Q8TBC4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.21■□□□□ 0.51
UBA3Q8TBC4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms