Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 FO538757.1-201ENST00000623083 1397 ntBASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNIP1Q8TAD8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SNIP1Q8TAD8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.21■□□□□ 0.18
SNIP1Q8TAD8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.21■□□□□ 0.18
SNIP1Q8TAD8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNIP1Q8TAD8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNIP1Q8TAD8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AKAP8P1-201ENST00000434743 1349 ntBASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 MYCLP1-201ENST00000372451 1075 ntBASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AC002558.1-201ENST00000488906 803 ntBASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 MIR6752-201ENST00000618442 71 ntBASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AL390754.1-201ENST00000619088 582 ntBASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AL645728.2-201ENST00000641974 660 ntBASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNIP1Q8TAD8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AC129492.6-201ENST00000611383 1305 ntBASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 PHGDH-209ENST00000641074 1780 ntBASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 TREML5P-201ENST00000421694 576 ntBASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 IGHV3-42-201ENST00000520410 361 ntBASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AC243562.1-201ENST00000560672 389 ntBASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 NEFHP1-201ENST00000412845 2629 ntBASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms