Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 RNA5SP415-201ENST00000517246 115 ntBASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 AC116407.2-201ENST00000613639 860 ntBASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 AC004817.3-201ENST00000602957 2129 ntBASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 REXO1L9P-201ENST00000604264 2108 ntBASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDND2Q8NHS1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 SIGLEC16-201ENST00000599858 1437 ntBASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 AC092865.5-201ENST00000545435 363 ntBASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 Z83851.2-201ENST00000609564 659 ntBASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 AC011270.2-201ENST00000624293 2550 ntBASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDND2Q8NHS1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 AC100803.2-201ENST00000562459 1963 ntBASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 AC034105.1-201ENST00000563488 319 ntBASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 AC027601.4-201ENST00000611259 610 ntBASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDND2Q8NHS1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms