Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 AL662844.1-201ENST00000546340 181 ntBASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 AL121894.2-201ENST00000602977 491 ntBASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC148Q8NFR7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 AC108860.2-201ENST00000562760 2183 ntBASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC148Q8NFR7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 GPR89P-201ENST00000407924 1495 ntBASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 AC008735.5-201ENST00000623544 497 ntBASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 LINC02012-201ENST00000608206 1725 ntBASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC148Q8NFR7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 AC148477.8-201ENST00000624298 468 ntBASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC148Q8NFR7 AC009053.2-201ENST00000563701 2365 ntBASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms