Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 AL138688.1-201ENST00000624851 1594 ntBASIC17.57■□□□□ 0.4
KDM1BQ8NB78 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM1BQ8NB78 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 AL590787.1-201ENST00000568856 1315 ntBASIC17.56■□□□□ 0.4
KDM1BQ8NB78 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 AL135999.2-201ENST00000622438 1686 ntBASIC17.56■□□□□ 0.4
KDM1BQ8NB78 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 AC004832.2-201ENST00000426397 482 ntBASIC17.56■□□□□ 0.4
KDM1BQ8NB78 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 AC010654.1-201ENST00000615722 808 ntBASIC17.56■□□□□ 0.4
KDM1BQ8NB78 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM1BQ8NB78 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 MRPL20P1-201ENST00000400819 433 ntBASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 DNAJB3-201ENST00000446806 729 ntBASIC17.55■□□□□ 0.4
KDM1BQ8NB78 AC092865.5-201ENST00000545435 363 ntBASIC17.55■□□□□ 0.4
KDM1BQ8NB78 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KDM1BQ8NB78 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms