Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 CRYGEP-201ENST00000412192 528 ntBASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 AC092053.1-201ENST00000605787 1936 ntBASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 RHOQP3-201ENST00000437982 621 ntBASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 FAM185BP-201ENST00000443595 716 ntBASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 AC124947.2-201ENST00000547118 1133 ntBASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 ACTL9-202ENST00000612068 1252 ntBASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ARHGEF39Q8N4T4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 AC096734.2-201ENST00000562054 433 ntBASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 AC010507.1-201ENST00000633895 436 ntBASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ARHGEF39Q8N4T4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms