Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 RPSAP43-201ENST00000402237 625 ntBASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 MED15P5-201ENST00000423150 992 ntBASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 RPS2P1-201ENST00000434010 821 ntBASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 AC068472.1-201ENST00000474589 881 ntBASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 SART3-203ENST00000546611 1184 ntBASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 FAM197Y3-203ENST00000618346 717 ntBASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM43AQ8N2R8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 AC012640.2-201ENST00000561606 901 ntBASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 INTS4P1-201ENST00000438455 1935 ntBASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM43AQ8N2R8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 LINC02199-201ENST00000506655 2702 ntBASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 AL136379.1-201ENST00000623471 2642 ntBASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 AC008741.2-201ENST00000612792 3115 ntBASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
FAM43AQ8N2R8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 PMS2P2-201ENST00000425039 1128 ntBASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 GPX1P2-201ENST00000429271 606 ntBASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 AC098831.1-202ENST00000438821 336 ntBASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 AP001160.2-201ENST00000596071 487 ntBASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 LINC02084-201ENST00000606069 1096 ntBASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FAM43AQ8N2R8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FAM43AQ8N2R8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms