Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.59■□□□□ 0.41
SIX5Q8N196 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SIX5Q8N196 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.58■□□□□ 0.41
SIX5Q8N196 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.58■□□□□ 0.41
SIX5Q8N196 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 AC007613.1-201ENST00000572811 2597 ntBASIC17.58■□□□□ 0.41
SIX5Q8N196 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.58■□□□□ 0.41
SIX5Q8N196 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIX5Q8N196 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.58■□□□□ 0.41
SIX5Q8N196 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.58■□□□□ 0.4
SIX5Q8N196 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.58■□□□□ 0.4
SIX5Q8N196 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 MYCLP1-201ENST00000372451 1075 ntBASIC17.58■□□□□ 0.4
SIX5Q8N196 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SIX5Q8N196 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.58■□□□□ 0.4
SIX5Q8N196 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.58■□□□□ 0.4
SIX5Q8N196 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.58■□□□□ 0.4
SIX5Q8N196 AC002558.1-201ENST00000488906 803 ntBASIC17.58■□□□□ 0.4
SIX5Q8N196 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.58■□□□□ 0.4
SIX5Q8N196 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.58■□□□□ 0.4
SIX5Q8N196 AC243562.1-201ENST00000560672 389 ntBASIC17.58■□□□□ 0.4
SIX5Q8N196 AL135744.1-201ENST00000565098 629 ntBASIC17.58■□□□□ 0.4
SIX5Q8N196 AC140878.1-201ENST00000565277 250 ntBASIC17.58■□□□□ 0.4
SIX5Q8N196 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.58■□□□□ 0.4
SIX5Q8N196 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SIX5Q8N196 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.58■□□□□ 0.4
SIX5Q8N196 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIX5Q8N196 BCL2-203ENST00000589955 5011 ntBASIC17.58■□□□□ 0.4
SIX5Q8N196 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SIX5Q8N196 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SIX5Q8N196 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SIX5Q8N196 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.57■□□□□ 0.4
SIX5Q8N196 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.57■□□□□ 0.4
SIX5Q8N196 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.57■□□□□ 0.4
SIX5Q8N196 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
SIX5Q8N196 AC129492.6-201ENST00000611383 1305 ntBASIC17.57■□□□□ 0.4
SIX5Q8N196 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.57■□□□□ 0.4
SIX5Q8N196 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.57■□□□□ 0.4
SIX5Q8N196 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.57■□□□□ 0.4
SIX5Q8N196 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.57■□□□□ 0.4
SIX5Q8N196 GPS2P2-201ENST00000430745 888 ntBASIC17.57■□□□□ 0.4
SIX5Q8N196 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.57■□□□□ 0.4
SIX5Q8N196 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.57■□□□□ 0.4
SIX5Q8N196 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SIX5Q8N196 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
SIX5Q8N196 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SIX5Q8N196 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SIX5Q8N196 HTR7P1-202ENST00000624664 4411 ntBASIC17.57■□□□□ 0.4
SIX5Q8N196 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIX5Q8N196 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
SIX5Q8N196 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.56■□□□□ 0.4
SIX5Q8N196 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.56■□□□□ 0.4
SIX5Q8N196 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms