Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 IGHV3-62-201ENST00000520057 340 ntBASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 AC010336.2-201ENST00000564226 506 ntBASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 AC004408.2-201ENST00000623613 2777 ntBASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 AL844908.2-201ENST00000609461 460 ntBASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.99■□□□□ 0.15
COL27A1Q8IZC6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 AL080243.2-201ENST00000418783 582 ntBASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 WASH4P-201ENST00000564273 1246 ntBASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.98■□□□□ 0.15
COL27A1Q8IZC6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 SLC25A6P5-201ENST00000435663 894 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 TEX28P1-201ENST00000613479 1221 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 TEX28P2-201ENST00000617764 1221 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 IGHV3-72-202ENST00000621503 303 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 AC063926.2-201ENST00000623766 1308 ntBASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.97■□□□□ 0.15
COL27A1Q8IZC6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms