Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 MIR943-201ENST00000401286 94 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AC107890.1-201ENST00000422478 521 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AC125807.1-201ENST00000483097 614 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AC239800.4-201ENST00000603712 296 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AC084121.4-201ENST00000641598 221 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AF228730.8-201ENST00000642140 221 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 UXT-AS1-201ENST00000590504 1525 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 AL355312.1-201ENST00000407115 2176 ntBASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS4Q8IUM7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 SPDYE7P-202ENST00000420373 878 ntBASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 AC026150.2-201ENST00000564693 1156 ntBASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 AC091167.2-201ENST00000579581 588 ntBASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 WASH6P-202ENST00000359512 1437 ntBASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS4Q8IUM7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 AL354751.1-201ENST00000412768 1863 ntBASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms