Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC23.04■■□□□ 1.28
NME9Q86XW9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.04■■□□□ 1.28
NME9Q86XW9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NME9Q86XW9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NME9Q86XW9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NME9Q86XW9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NME9Q86XW9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC23.03■■□□□ 1.28
NME9Q86XW9 AC093525.9-201ENST00000624961 1746 ntBASIC23.03■■□□□ 1.28
NME9Q86XW9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.03■■□□□ 1.28
NME9Q86XW9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 RN7SL589P-201ENST00000481268 310 ntBASIC23.03■■□□□ 1.28
NME9Q86XW9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NME9Q86XW9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
NME9Q86XW9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
NME9Q86XW9 DUX4L27-201ENST00000554796 1261 ntBASIC23.03■■□□□ 1.28
NME9Q86XW9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.03■■□□□ 1.28
NME9Q86XW9 LINC01225-203ENST00000563550 1244 ntBASIC23.03■■□□□ 1.28
NME9Q86XW9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
NME9Q86XW9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.03■■□□□ 1.28
NME9Q86XW9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC23.03■■□□□ 1.28
NME9Q86XW9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NME9Q86XW9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.02■■□□□ 1.28
NME9Q86XW9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.02■■□□□ 1.28
NME9Q86XW9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC23.02■■□□□ 1.28
NME9Q86XW9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC23.02■■□□□ 1.28
NME9Q86XW9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.02■■□□□ 1.28
NME9Q86XW9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 AL353732.1-201ENST00000569618 1459 ntBASIC23.02■■□□□ 1.28
NME9Q86XW9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NME9Q86XW9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.02■■□□□ 1.28
NME9Q86XW9 AKAP8P1-201ENST00000434743 1349 ntBASIC23.02■■□□□ 1.28
NME9Q86XW9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.02■■□□□ 1.28
NME9Q86XW9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NME9Q86XW9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
NME9Q86XW9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC23.01■■□□□ 1.27
NME9Q86XW9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 AC134043.2-201ENST00000624206 2238 ntBASIC23.01■■□□□ 1.27
NME9Q86XW9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC23.01■■□□□ 1.27
NME9Q86XW9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
NME9Q86XW9 KRT18P32-201ENST00000424695 1287 ntBASIC23.01■■□□□ 1.27
NME9Q86XW9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC23.01■■□□□ 1.27
NME9Q86XW9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.01■■□□□ 1.27
NME9Q86XW9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.01■■□□□ 1.27
NME9Q86XW9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.01■■□□□ 1.27
NME9Q86XW9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.01■■□□□ 1.27
NME9Q86XW9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC23.01■■□□□ 1.27
NME9Q86XW9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23.01■■□□□ 1.27
NME9Q86XW9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NME9Q86XW9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
NME9Q86XW9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC23■■□□□ 1.27
NME9Q86XW9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC23■■□□□ 1.27
NME9Q86XW9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
NME9Q86XW9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23■■□□□ 1.27
NME9Q86XW9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23■■□□□ 1.27
NME9Q86XW9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NME9Q86XW9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 AC092474.2-201ENST00000424288 719 ntBASIC23■■□□□ 1.27
NME9Q86XW9 FAM86GP-201ENST00000448322 971 ntBASIC23■■□□□ 1.27
NME9Q86XW9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC23■■□□□ 1.27
NME9Q86XW9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC23■■□□□ 1.27
NME9Q86XW9 AC015911.4-201ENST00000588022 1070 ntBASIC23■■□□□ 1.27
NME9Q86XW9 AL096865.1-201ENST00000606796 927 ntBASIC23■■□□□ 1.27
NME9Q86XW9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC23■■□□□ 1.27
NME9Q86XW9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NME9Q86XW9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC23■■□□□ 1.27
NME9Q86XW9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms