Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AL121761.2-201ENST00000598007 1648 ntBASIC21.61■■□□□ 1.05
COPS6Q7L5N1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS6Q7L5N1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 AC116353.5-201ENST00000638148 1699 ntBASIC21.6■■□□□ 1.05
COPS6Q7L5N1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 HMGA1P7-201ENST00000406908 502 ntBASIC21.6■■□□□ 1.05
COPS6Q7L5N1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 ADH5P3-201ENST00000433842 1137 ntBASIC21.6■■□□□ 1.05
COPS6Q7L5N1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 HMGN1P19-201ENST00000436976 333 ntBASIC21.6■■□□□ 1.05
COPS6Q7L5N1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 AC099522.2-201ENST00000607001 744 ntBASIC21.6■■□□□ 1.05
COPS6Q7L5N1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS6Q7L5N1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPS6Q7L5N1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 AL139400.1-201ENST00000366220 510 ntBASIC21.58■■□□□ 1.05
COPS6Q7L5N1 AC002056.1-201ENST00000395613 760 ntBASIC21.58■■□□□ 1.05
COPS6Q7L5N1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 AC022145.2-201ENST00000598203 171 ntBASIC21.58■■□□□ 1.05
COPS6Q7L5N1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COPS6Q7L5N1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.58■■□□□ 1.04
COPS6Q7L5N1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COPS6Q7L5N1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
COPS6Q7L5N1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COPS6Q7L5N1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COPS6Q7L5N1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
COPS6Q7L5N1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
COPS6Q7L5N1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms