Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 AC141257.4-201ENST00000634557 245 ntBASIC15.09■□□□□ 0.01
C11orf88Q6PI97 AC136944.6-201ENST00000634818 245 ntBASIC15.09■□□□□ 0.01
C11orf88Q6PI97 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.08■□□□□ 0.01
C11orf88Q6PI97 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.08■□□□□ 0
C11orf88Q6PI97 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.08■□□□□ 0
C11orf88Q6PI97 MIR564-202ENST00000385049 94 ntBASIC15.08■□□□□ 0
C11orf88Q6PI97 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.08■□□□□ 0
C11orf88Q6PI97 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.08■□□□□ 0
C11orf88Q6PI97 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.08■□□□□ 0
C11orf88Q6PI97 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.08■□□□□ 0
C11orf88Q6PI97 TSPY5P-201ENST00000426936 936 ntBASIC15.08■□□□□ 0
C11orf88Q6PI97 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.08■□□□□ 0
C11orf88Q6PI97 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.08■□□□□ 0
C11orf88Q6PI97 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.08■□□□□ 0
C11orf88Q6PI97 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.08■□□□□ 0
C11orf88Q6PI97 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
C11orf88Q6PI97 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
C11orf88Q6PI97 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.08■□□□□ 0
C11orf88Q6PI97 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.08■□□□□ 0
C11orf88Q6PI97 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.08■□□□□ 0
C11orf88Q6PI97 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
C11orf88Q6PI97 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf88Q6PI97 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.07■□□□□ 0
C11orf88Q6PI97 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.07■□□□□ 0
C11orf88Q6PI97 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.07■□□□□ 0
C11orf88Q6PI97 AC097376.2-205ENST00000610159 5334 ntBASIC15.07■□□□□ 0
C11orf88Q6PI97 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.07■□□□□ 0
C11orf88Q6PI97 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 AC117947.1-201ENST00000427448 529 ntBASIC15.07■□□□□ 0
C11orf88Q6PI97 YBX1P2-201ENST00000489612 999 ntBASIC15.07■□□□□ 0
C11orf88Q6PI97 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.07■□□□□ 0
C11orf88Q6PI97 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.07■□□□□ 0
C11orf88Q6PI97 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.07■□□□□ 0
C11orf88Q6PI97 AC140113.3-201ENST00000605663 199 ntBASIC15.07■□□□□ 0
C11orf88Q6PI97 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 AL513477.1-201ENST00000602865 2407 ntBASIC15.07■□□□□ 0
C11orf88Q6PI97 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.07■□□□□ 0
C11orf88Q6PI97 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms