Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AC103564.2-201ENST00000432853 1299 ntBASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AC092597.1-201ENST00000487352 616 ntBASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AC063926.3-201ENST00000624734 5658 ntBASIC17.39■□□□□ 0.37
LGSNQ5TDP6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.39■□□□□ 0.37
LGSNQ5TDP6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 BX664615.1-201ENST00000443558 458 ntBASIC17.38■□□□□ 0.37
LGSNQ5TDP6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 AC019129.2-201ENST00000609837 1235 ntBASIC17.38■□□□□ 0.37
LGSNQ5TDP6 AC011558.1-201ENST00000623459 338 ntBASIC17.38■□□□□ 0.37
LGSNQ5TDP6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LGSNQ5TDP6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 AC068587.6-202ENST00000641839 5619 ntBASIC17.37■□□□□ 0.37
LGSNQ5TDP6 AC092068.3-201ENST00000587894 2016 ntBASIC17.37■□□□□ 0.37
LGSNQ5TDP6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.37■□□□□ 0.37
LGSNQ5TDP6 AC122714.2-201ENST00000502787 707 ntBASIC17.37■□□□□ 0.37
LGSNQ5TDP6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.37■□□□□ 0.37
LGSNQ5TDP6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
LGSNQ5TDP6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGSNQ5TDP6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGSNQ5TDP6 EGFEM1P-202ENST00000431685 1563 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms