Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 AC005915.1-201ENST00000624912 2018 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 RNPS1P1-201ENST00000507437 918 ntBASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 AC148477.8-201ENST00000624298 468 ntBASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN20Q4JDL3 AC006504.4-201ENST00000592118 1568 ntBASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.08■□□□□ 0.49
PTPN20Q4JDL3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AP002414.1-201ENST00000391405 1147 ntBASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 FAAHP1-202ENST00000446499 1238 ntBASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 DUX4L17-201ENST00000557360 1267 ntBASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AC105020.1-201ENST00000435356 2205 ntBASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN20Q4JDL3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 KRT18P27-201ENST00000427733 1299 ntBASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 KRT18P67-201ENST00000432816 1264 ntBASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 OR7E14P-202ENST00000530490 1290 ntBASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AP002469.2-201ENST00000531724 424 ntBASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms