Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM71Q2Q1W2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM71Q2Q1W2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM71Q2Q1W2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM71Q2Q1W2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM71Q2Q1W2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
TRIM71Q2Q1W2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM71Q2Q1W2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 KRT8P23-201ENST00000560090 1207 ntBASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM71Q2Q1W2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 MIR661-201ENST00000384842 89 ntBASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 SPDYE14P-201ENST00000442619 822 ntBASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 KLF2P3-201ENST00000451977 1087 ntBASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 AC026150.2-201ENST00000564693 1156 ntBASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM71Q2Q1W2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 AC012317.2-201ENST00000623305 2251 ntBASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 PMS2P4-201ENST00000412466 1052 ntBASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms