Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC009477.1-201ENST00000452936 217 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC008738.7-201ENST00000609744 511 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC008267.7-201ENST00000624570 1194 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 COX11-210ENST00000639671 696 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC100803.2-201ENST00000562459 1963 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 KRT223P-202ENST00000449164 1292 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AP005482.1-201ENST00000563722 1273 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AC027307.2-201ENST00000591252 911 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AL009183.1-201ENST00000603760 355 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AC003101.2-201ENST00000612557 442 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AC133552.6-201ENST00000613406 534 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 CROCCP3-202ENST00000420820 1947 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AC104581.1-202ENST00000635932 2618 ntBASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO4Q2I0M5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 AC087499.6-201ENST00000411576 835 ntBASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 AC009407.1-201ENST00000568958 598 ntBASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 RN7SL219P-201ENST00000582872 296 ntBASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
RSPO4Q2I0M5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms