Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2B3Q16720 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2B3Q16720 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2B3Q16720 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2B3Q16720 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2B3Q16720 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2B3Q16720 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2B3Q16720 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ATP2B3Q16720 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2B3Q16720 MIR1233-2-201ENST00000408138 82 ntBASIC21.05■□□□□ 0.96
ATP2B3Q16720 MIR1233-1-201ENST00000408722 82 ntBASIC21.05■□□□□ 0.96
ATP2B3Q16720 SLC25A6P2-201ENST00000497974 877 ntBASIC21.05■□□□□ 0.96
ATP2B3Q16720 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2B3Q16720 AL513190.1-201ENST00000621254 727 ntBASIC21.05■□□□□ 0.96
ATP2B3Q16720 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2B3Q16720 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2B3Q16720 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2B3Q16720 PRORSD1P-202ENST00000563365 2154 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 HCG11-201ENST00000411553 5696 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 SLC25A1P3-201ENST00000395415 828 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 GPX1P2-201ENST00000429271 606 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 AC096734.2-201ENST00000562054 433 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 AC002310.6-201ENST00000624451 1377 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.04■□□□□ 0.96
ATP2B3Q16720 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2B3Q16720 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2B3Q16720 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 RPSAP43-201ENST00000402237 625 ntBASIC21.03■□□□□ 0.96
ATP2B3Q16720 UPF3AP3-201ENST00000420996 769 ntBASIC21.03■□□□□ 0.96
ATP2B3Q16720 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2B3Q16720 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 AC016396.2-201ENST00000562575 1417 ntBASIC21.03■□□□□ 0.96
ATP2B3Q16720 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ATP2B3Q16720 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2B3Q16720 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ATP2B3Q16720 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
ATP2B3Q16720 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ATP2B3Q16720 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2B3Q16720 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2B3Q16720 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP2B3Q16720 RHOQP3-201ENST00000437982 621 ntBASIC21.02■□□□□ 0.96
ATP2B3Q16720 DNAJB3-201ENST00000446806 729 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms