Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GCNT1Q02742 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
GCNT1Q02742 AC243591.1-201ENST00000452967 1364 ntBASIC18.35■□□□□ 0.53
GCNT1Q02742 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 AL450487.1-201ENST00000426799 995 ntBASIC18.35■□□□□ 0.53
GCNT1Q02742 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.35■□□□□ 0.53
GCNT1Q02742 AC006557.2-201ENST00000592985 1240 ntBASIC18.35■□□□□ 0.53
GCNT1Q02742 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.35■□□□□ 0.53
GCNT1Q02742 TERC-201ENST00000602385 541 ntBASIC18.35■□□□□ 0.53
GCNT1Q02742 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT1Q02742 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GCNT1Q02742 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
GCNT1Q02742 AC106886.4-201ENST00000623557 2502 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GCNT1Q02742 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
GCNT1Q02742 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 TUBB8P12-201ENST00000308911 1335 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 TUBB7P-202ENST00000428444 1305 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 TUBB8P7-204ENST00000567960 1332 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.34■□□□□ 0.53
GCNT1Q02742 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT1Q02742 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.34■□□□□ 0.53
GCNT1Q02742 AC073648.2-201ENST00000510116 352 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT1Q02742 RN7SL510P-201ENST00000581311 263 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT1Q02742 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
GCNT1Q02742 AL691432.3-201ENST00000621860 400 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 TP73-AS1-207ENST00000624167 988 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GCNT1Q02742 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
GCNT1Q02742 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT1Q02742 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT1Q02742 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GCNT1Q02742 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT1Q02742 NKILA-202ENST00000614771 2598 ntBASIC18.34■□□□□ 0.53
GCNT1Q02742 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
GCNT1Q02742 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
GCNT1Q02742 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GCNT1Q02742 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.33■□□□□ 0.53
GCNT1Q02742 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT1Q02742 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
GCNT1Q02742 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.33■□□□□ 0.53
GCNT1Q02742 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.33■□□□□ 0.53
GCNT1Q02742 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GCNT1Q02742 FAAHP1-202ENST00000446499 1238 ntBASIC18.33■□□□□ 0.52
GCNT1Q02742 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT1Q02742 RNPS1P1-201ENST00000507437 918 ntBASIC18.33■□□□□ 0.52
GCNT1Q02742 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
GCNT1Q02742 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT1Q02742 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.33■□□□□ 0.52
GCNT1Q02742 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT1Q02742 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.33■□□□□ 0.52
GCNT1Q02742 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.33■□□□□ 0.52
GCNT1Q02742 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT1Q02742 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.33■□□□□ 0.52
GCNT1Q02742 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
GCNT1Q02742 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
GCNT1Q02742 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms