Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.93□□□□□ -0.02
UBA52P62987 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
UBA52P62987 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.93□□□□□ -0.02
UBA52P62987 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
UBA52P62987 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 TSPY19P-201ENST00000418461 509 ntBASIC14.93□□□□□ -0.02
UBA52P62987 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.93□□□□□ -0.02
UBA52P62987 DRAXINP1-201ENST00000437611 948 ntBASIC14.93□□□□□ -0.02
UBA52P62987 TSPY18P-201ENST00000441642 509 ntBASIC14.93□□□□□ -0.02
UBA52P62987 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.93□□□□□ -0.02
UBA52P62987 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.93□□□□□ -0.02
UBA52P62987 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.93□□□□□ -0.02
UBA52P62987 TPSP2-201ENST00000561760 610 ntBASIC14.93□□□□□ -0.02
UBA52P62987 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.93□□□□□ -0.02
UBA52P62987 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.93□□□□□ -0.02
UBA52P62987 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.93□□□□□ -0.02
UBA52P62987 AL732292.2-201ENST00000609649 430 ntBASIC14.93□□□□□ -0.02
UBA52P62987 AC068587.9-201ENST00000641814 219 ntBASIC14.93□□□□□ -0.02
UBA52P62987 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.93□□□□□ -0.02
UBA52P62987 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UBA52P62987 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
UBA52P62987 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.92□□□□□ -0.02
UBA52P62987 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
UBA52P62987 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.92□□□□□ -0.02
UBA52P62987 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.92□□□□□ -0.02
UBA52P62987 AP000347.1-202ENST00000435868 847 ntBASIC14.92□□□□□ -0.02
UBA52P62987 EMBP1-201ENST00000458200 901 ntBASIC14.92□□□□□ -0.02
UBA52P62987 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 AC091304.2-201ENST00000564639 760 ntBASIC14.92□□□□□ -0.02
UBA52P62987 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.92□□□□□ -0.02
UBA52P62987 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.92□□□□□ -0.02
UBA52P62987 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
UBA52P62987 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UBA52P62987 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
UBA52P62987 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.92□□□□□ -0.02
UBA52P62987 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 AL603756.1-201ENST00000606511 2163 ntBASIC14.92□□□□□ -0.02
UBA52P62987 PCDHB17P-201ENST00000539533 2393 ntBASIC14.92□□□□□ -0.02
UBA52P62987 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.92□□□□□ -0.02
UBA52P62987 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
UBA52P62987 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 AC026691.1-201ENST00000602502 2017 ntBASIC14.92□□□□□ -0.02
UBA52P62987 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
UBA52P62987 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.92□□□□□ -0.02
UBA52P62987 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBA52P62987 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UBA52P62987 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.91□□□□□ -0.02
UBA52P62987 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.91□□□□□ -0.02
UBA52P62987 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.91□□□□□ -0.02
UBA52P62987 TOB2P1-201ENST00000469761 992 ntBASIC14.91□□□□□ -0.02
UBA52P62987 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.91□□□□□ -0.02
UBA52P62987 AC012615.1-201ENST00000565797 1299 ntBASIC14.91□□□□□ -0.02
UBA52P62987 RNF126P1-202ENST00000569893 925 ntBASIC14.91□□□□□ -0.02
UBA52P62987 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
UBA52P62987 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 AL031008.1-201ENST00000619963 541 ntBASIC14.91□□□□□ -0.02
UBA52P62987 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
UBA52P62987 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
UBA52P62987 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 AC063926.3-201ENST00000624734 5658 ntBASIC14.91□□□□□ -0.02
UBA52P62987 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms