Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 RHOQP3-201ENST00000437982 621 ntBASIC18.62■□□□□ 0.57
BCAR1P56945 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.62■□□□□ 0.57
BCAR1P56945 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.62■□□□□ 0.57
BCAR1P56945 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.62■□□□□ 0.57
BCAR1P56945 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 AC006116.8-202ENST00000587620 1550 ntBASIC18.62■□□□□ 0.57
BCAR1P56945 PI4KAP1-204ENST00000612579 1703 ntBASIC18.62■□□□□ 0.57
BCAR1P56945 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
BCAR1P56945 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.62■□□□□ 0.57
BCAR1P56945 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.62■□□□□ 0.57
BCAR1P56945 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BCAR1P56945 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BCAR1P56945 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCAR1P56945 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
BCAR1P56945 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 LINC00896-202ENST00000609602 2128 ntBASIC18.61■□□□□ 0.57
BCAR1P56945 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
BCAR1P56945 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.61■□□□□ 0.57
BCAR1P56945 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.61■□□□□ 0.57
BCAR1P56945 AC025580.3-201ENST00000617932 1424 ntBASIC18.61■□□□□ 0.57
BCAR1P56945 AL590787.1-201ENST00000568856 1315 ntBASIC18.61■□□□□ 0.57
BCAR1P56945 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.61■□□□□ 0.57
BCAR1P56945 CNN2P11-201ENST00000429351 262 ntBASIC18.61■□□□□ 0.57
BCAR1P56945 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BCAR1P56945 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BCAR1P56945 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
BCAR1P56945 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.61■□□□□ 0.57
BCAR1P56945 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCAR1P56945 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BCAR1P56945 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 ACTG1P4-201ENST00000425123 1122 ntBASIC18.6■□□□□ 0.57
BCAR1P56945 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.6■□□□□ 0.57
BCAR1P56945 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.6■□□□□ 0.57
BCAR1P56945 AL031432.2-201ENST00000566714 459 ntBASIC18.6■□□□□ 0.57
BCAR1P56945 AL928711.1-201ENST00000570165 459 ntBASIC18.6■□□□□ 0.57
BCAR1P56945 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BCAR1P56945 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.6■□□□□ 0.57
BCAR1P56945 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.6■□□□□ 0.57
BCAR1P56945 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.6■□□□□ 0.57
BCAR1P56945 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCAR1P56945 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BCAR1P56945 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BCAR1P56945 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BCAR1P56945 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.59■□□□□ 0.57
BCAR1P56945 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BCAR1P56945 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.59■□□□□ 0.57
BCAR1P56945 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms