Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
WNT3P56703 RCN1P2-201ENST00000398357 915 ntBASIC16.29■□□□□ 0.2
WNT3P56703 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
WNT3P56703 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
WNT3P56703 AC104819.1-201ENST00000504587 486 ntBASIC16.29■□□□□ 0.2
WNT3P56703 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.29■□□□□ 0.2
WNT3P56703 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.29■□□□□ 0.2
WNT3P56703 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT3P56703 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT3P56703 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.29■□□□□ 0.2
WNT3P56703 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
WNT3P56703 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
WNT3P56703 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT3P56703 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT3P56703 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT3P56703 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT3P56703 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.29■□□□□ 0.2
WNT3P56703 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
WNT3P56703 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 AC148477.5-201ENST00000625164 1645 ntBASIC16.28■□□□□ 0.2
WNT3P56703 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 KRT17P6-201ENST00000453795 1220 ntBASIC16.28■□□□□ 0.2
WNT3P56703 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
WNT3P56703 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.28■□□□□ 0.2
WNT3P56703 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
WNT3P56703 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 NSUN5P1-202ENST00000421140 1535 ntBASIC16.28■□□□□ 0.2
WNT3P56703 NSUN5P2-203ENST00000457352 1529 ntBASIC16.28■□□□□ 0.2
WNT3P56703 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
WNT3P56703 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
WNT3P56703 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT3P56703 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
WNT3P56703 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
WNT3P56703 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.27■□□□□ 0.2
WNT3P56703 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.27■□□□□ 0.2
WNT3P56703 EMBP1-201ENST00000458200 901 ntBASIC16.27■□□□□ 0.2
WNT3P56703 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.27■□□□□ 0.2
WNT3P56703 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.27■□□□□ 0.2
WNT3P56703 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.27■□□□□ 0.2
WNT3P56703 AC012615.1-201ENST00000565797 1299 ntBASIC16.27■□□□□ 0.2
WNT3P56703 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.27■□□□□ 0.2
WNT3P56703 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.27■□□□□ 0.2
WNT3P56703 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.27■□□□□ 0.2
WNT3P56703 Z69720.1-201ENST00000601483 472 ntBASIC16.27■□□□□ 0.2
WNT3P56703 AC099336.1-202ENST00000602961 463 ntBASIC16.27■□□□□ 0.2
WNT3P56703 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.27■□□□□ 0.2
WNT3P56703 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
WNT3P56703 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
WNT3P56703 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.27■□□□□ 0.19
WNT3P56703 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
WNT3P56703 AL603756.1-201ENST00000606511 2163 ntBASIC16.27■□□□□ 0.19
WNT3P56703 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
WNT3P56703 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
WNT3P56703 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
WNT3P56703 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.26■□□□□ 0.19
WNT3P56703 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
WNT3P56703 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 PCDHB17P-201ENST00000539533 2393 ntBASIC16.26■□□□□ 0.19
WNT3P56703 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.26■□□□□ 0.19
WNT3P56703 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
WNT3P56703 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
WNT3P56703 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms