Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 HMGA1P7-201ENST00000406908 502 ntBASIC17.1■□□□□ 0.33
NUBP1P53384 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.1■□□□□ 0.33
NUBP1P53384 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.1■□□□□ 0.33
NUBP1P53384 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC17.1■□□□□ 0.33
NUBP1P53384 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 AC107918.2-201ENST00000530817 355 ntBASIC17.1■□□□□ 0.33
NUBP1P53384 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
NUBP1P53384 AC027307.2-201ENST00000591252 911 ntBASIC17.1■□□□□ 0.33
NUBP1P53384 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC17.1■□□□□ 0.33
NUBP1P53384 AC099568.2-201ENST00000609194 695 ntBASIC17.1■□□□□ 0.33
NUBP1P53384 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.1■□□□□ 0.33
NUBP1P53384 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUBP1P53384 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUBP1P53384 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.1■□□□□ 0.33
NUBP1P53384 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.09■□□□□ 0.33
NUBP1P53384 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.09■□□□□ 0.33
NUBP1P53384 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
NUBP1P53384 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.09■□□□□ 0.33
NUBP1P53384 AC004945.1-201ENST00000416738 983 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NUBP1P53384 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 AC098826.2-201ENST00000452011 651 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.09■□□□□ 0.33
NUBP1P53384 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.09■□□□□ 0.33
NUBP1P53384 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
NUBP1P53384 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 AL138828.2-201ENST00000615812 383 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 SPDYE12P-201ENST00000618416 771 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 AC138907.10-201ENST00000623708 983 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NUBP1P53384 AC087499.5-201ENST00000452760 1342 ntBASIC17.09■□□□□ 0.33
NUBP1P53384 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NUBP1P53384 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.09■□□□□ 0.33
NUBP1P53384 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUBP1P53384 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NUBP1P53384 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
NUBP1P53384 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.08■□□□□ 0.33
NUBP1P53384 AL499627.1-201ENST00000569373 2188 ntBASIC17.08■□□□□ 0.33
NUBP1P53384 AL032819.2-201ENST00000624543 2162 ntBASIC17.08■□□□□ 0.33
NUBP1P53384 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 ESPNP-201ENST00000270691 2015 ntBASIC17.08■□□□□ 0.33
NUBP1P53384 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
NUBP1P53384 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.08■□□□□ 0.33
NUBP1P53384 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NUBP1P53384 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
NUBP1P53384 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.08■□□□□ 0.33
NUBP1P53384 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.08■□□□□ 0.33
NUBP1P53384 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUBP1P53384 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NUBP1P53384 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.08■□□□□ 0.32
NUBP1P53384 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NUBP1P53384 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NUBP1P53384 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.08■□□□□ 0.32
NUBP1P53384 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 AL353626.3-201ENST00000413399 657 ntBASIC17.08■□□□□ 0.32
NUBP1P53384 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms