Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.93■□□□□ 0.3
GTF2A1P52655 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.93■□□□□ 0.3
GTF2A1P52655 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
GTF2A1P52655 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GTF2A1P52655 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GTF2A1P52655 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GTF2A1P52655 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GTF2A1P52655 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
GTF2A1P52655 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.92■□□□□ 0.3
GTF2A1P52655 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.92■□□□□ 0.3
GTF2A1P52655 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GTF2A1P52655 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GTF2A1P52655 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.92■□□□□ 0.3
GTF2A1P52655 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.91■□□□□ 0.3
GTF2A1P52655 RNF216P1-203ENST00000404404 2427 ntBASIC16.91■□□□□ 0.3
GTF2A1P52655 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GTF2A1P52655 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.91■□□□□ 0.3
GTF2A1P52655 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.91■□□□□ 0.3
GTF2A1P52655 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
GTF2A1P52655 AL390719.1-204ENST00000412397 1219 ntBASIC16.91■□□□□ 0.3
GTF2A1P52655 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.91■□□□□ 0.3
GTF2A1P52655 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms