Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6CP51160 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6CP51160 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6CP51160 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE6CP51160 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDE6CP51160 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDE6CP51160 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6CP51160 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE6CP51160 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6CP51160 AC093909.1-201ENST00000504731 1122 ntBASIC18.62■□□□□ 0.57
PDE6CP51160 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.62■□□□□ 0.57
PDE6CP51160 AC073648.2-201ENST00000510116 352 ntBASIC18.62■□□□□ 0.57
PDE6CP51160 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6CP51160 AP001005.1-201ENST00000571755 1248 ntBASIC18.62■□□□□ 0.57
PDE6CP51160 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6CP51160 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6CP51160 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6CP51160 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDE6CP51160 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDE6CP51160 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
PDE6CP51160 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6CP51160 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6CP51160 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.61■□□□□ 0.57
PDE6CP51160 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6CP51160 RPS2P28-201ENST00000314255 741 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.61■□□□□ 0.57
PDE6CP51160 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.61■□□□□ 0.57
PDE6CP51160 MRPL3P1-201ENST00000400109 1033 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 ABCD1P5-201ENST00000445663 754 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 STK19B-204ENST00000512515 211 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 MTDHP3-201ENST00000594186 672 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PDE6CP51160 AD000864.1-201ENST00000624076 2295 ntBASIC18.61■□□□□ 0.57
PDE6CP51160 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PDE6CP51160 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6CP51160 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PDE6CP51160 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PDE6CP51160 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDE6CP51160 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDE6CP51160 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE6CP51160 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE6CP51160 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE6CP51160 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.6■□□□□ 0.57
PDE6CP51160 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE6CP51160 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 AC003669.1-201ENST00000334569 611 ntBASIC18.6■□□□□ 0.57
PDE6CP51160 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6CP51160 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms