Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 AF228730.7-201ENST00000641842 219 ntBASIC16.61■□□□□ 0.25
RAB28P51157 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB28P51157 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB28P51157 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB28P51157 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.6■□□□□ 0.25
RAB28P51157 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB28P51157 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 AL645608.8-201ENST00000606034 2086 ntBASIC16.6■□□□□ 0.25
RAB28P51157 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.6■□□□□ 0.25
RAB28P51157 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB28P51157 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB28P51157 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB28P51157 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB28P51157 AC145285.3-201ENST00000564603 959 ntBASIC16.6■□□□□ 0.25
RAB28P51157 Z83851.2-201ENST00000609564 659 ntBASIC16.6■□□□□ 0.25
RAB28P51157 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB28P51157 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.6■□□□□ 0.25
RAB28P51157 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RAB28P51157 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB28P51157 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB28P51157 PAWRP1-201ENST00000451083 565 ntBASIC16.59■□□□□ 0.25
RAB28P51157 RPL13AP23-201ENST00000480739 586 ntBASIC16.59■□□□□ 0.25
RAB28P51157 AC108751.1-201ENST00000490852 363 ntBASIC16.59■□□□□ 0.25
RAB28P51157 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB28P51157 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB28P51157 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB28P51157 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB28P51157 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB28P51157 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.59■□□□□ 0.25
RAB28P51157 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB28P51157 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 PKD1P1-201ENST00000458669 6805 ntBASIC16.59■□□□□ 0.25
RAB28P51157 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB28P51157 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB28P51157 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB28P51157 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB28P51157 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB28P51157 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
RAB28P51157 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB28P51157 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB28P51157 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB28P51157 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB28P51157 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB28P51157 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB28P51157 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB28P51157 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB28P51157 AC009947.1-201ENST00000444350 727 ntBASIC16.58■□□□□ 0.24
RAB28P51157 AC108073.2-201ENST00000464002 357 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms