Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.32■□□□□ 0.04
LHX2P50458 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.32■□□□□ 0.04
LHX2P50458 ACTL9-202ENST00000612068 1252 ntBASIC15.32■□□□□ 0.04
LHX2P50458 AC006538.3-201ENST00000612495 578 ntBASIC15.32■□□□□ 0.04
LHX2P50458 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.32■□□□□ 0.04
LHX2P50458 AC004877.2-201ENST00000623941 599 ntBASIC15.32■□□□□ 0.04
LHX2P50458 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.32■□□□□ 0.04
LHX2P50458 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.32■□□□□ 0.04
LHX2P50458 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LHX2P50458 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.32■□□□□ 0.04
LHX2P50458 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LHX2P50458 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LHX2P50458 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 MCCD1P2-201ENST00000423228 335 ntBASIC15.31■□□□□ 0.04
LHX2P50458 DNAJB3-201ENST00000446806 729 ntBASIC15.31■□□□□ 0.04
LHX2P50458 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 AC107918.2-201ENST00000530817 355 ntBASIC15.31■□□□□ 0.04
LHX2P50458 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 KRT19P2-202ENST00000557173 1012 ntBASIC15.31■□□□□ 0.04
LHX2P50458 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LHX2P50458 MTDHP5-201ENST00000598980 586 ntBASIC15.31■□□□□ 0.04
LHX2P50458 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.31■□□□□ 0.04
LHX2P50458 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.31■□□□□ 0.04
LHX2P50458 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 BCAR1-209ENST00000546196 1340 ntBASIC15.31■□□□□ 0.04
LHX2P50458 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.31■□□□□ 0.04
LHX2P50458 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LHX2P50458 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LHX2P50458 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LHX2P50458 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX2P50458 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LHX2P50458 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX2P50458 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX2P50458 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX2P50458 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LHX2P50458 UPF3AP3-201ENST00000420996 769 ntBASIC15.3■□□□□ 0.04
LHX2P50458 GPX1P2-201ENST00000429271 606 ntBASIC15.3■□□□□ 0.04
LHX2P50458 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.3■□□□□ 0.04
LHX2P50458 PDPK2P-202ENST00000562415 1191 ntBASIC15.3■□□□□ 0.04
LHX2P50458 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 AC010327.4-202ENST00000591484 748 ntBASIC15.3■□□□□ 0.04
LHX2P50458 AC023141.13-201ENST00000604991 943 ntBASIC15.3■□□□□ 0.04
LHX2P50458 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.3■□□□□ 0.04
LHX2P50458 GPALPP1-207ENST00000611650 899 ntBASIC15.3■□□□□ 0.04
LHX2P50458 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 REXO1L3P-201ENST00000622202 1288 ntBASIC15.3■□□□□ 0.04
LHX2P50458 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX2P50458 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX2P50458 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms